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  5. Pp3c18_19690V3.1

Pp3c18_19690V3.1


Description : expansin A16


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_19690V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT1G20190 No alias expansin 11 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G37640 No alias Barwin-like endoglucanases superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40610 No alias expansin A8 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G29030 No alias expansin A5 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22700.1 No alias alpha-class expansin 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_18510V3.1 No alias expansin A14 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!