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  5. Pp3c18_5230V3.1

Pp3c18_5230V3.1


Description : spliceosome protein-related


Gene families : OG_01_0003744 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003744_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_5230V3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AT1G54380 No alias spliceosome protein-related 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g405650 No alias RNA processing.RNA splicing.spliceosome... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g01570.1 No alias GEMIN2 spliceosome assembly factor 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006354 DNA-templated transcription, elongation IEP HCCA
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!