- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : No annotation
Gene families : OG_01_0000079 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000079_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c19_11510V3.1 | |
| Cluster | HCCA: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp3c11_15740V3.1 | No alias | nuclear RNA polymerase A1 | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c11_15750V3.1 | No alias | uracil dna glycosylase | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c14_231V3.1 | No alias | nuclear RNA polymerase D1A | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c14_3990V3.1 | No alias | uracil dna glycosylase | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c14_4000V3.1 | No alias | RNA polymerase II large subunit | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c14_4010V3.1 | No alias | RNA polymerase II large subunit | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c15_19420V3.1 | No alias | nuclear RNA polymerase A1 | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c16_10730V3.1 | No alias | uracil dna glycosylase | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c16_12590V3.1 | No alias | uracil dna glycosylase | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c1_280V3.1 | No alias | uracil dna glycosylase | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c1_30040V3.1 | No alias | RNA polymerase II large subunit | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c22_9940V3.1 | No alias | RNA polymerase II large subunit | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c24_10300V3.1 | No alias | RNA polymerase II large subunit | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c4_1950V3.1 | No alias | uracil dna glycosylase | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c4_24940V3.1 | No alias | RNA polymerase II large subunit | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c6_15700V3.1 | No alias | nuclear RNA polymerase C1 | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c8_4620V3.1 | No alias | RNA polymerase II large subunit | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c9_12680V3.1 | No alias | RNA polymerase II large subunit | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c9_17820V3.1 | No alias | uracil dna glycosylase | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3s67_100V3.1 | No alias | uracil dna glycosylase | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3s67_110V3.1 | No alias | RNA polymerase II large subunit | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0043531 | ADP binding | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |