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AT2G05642


Description : Nucleic acid-binding, OB-fold-like protein


Gene families : OG_01_0003139 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G05642
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT1G36510 No alias Nucleic acid-binding proteins superfamily 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
MF GO:0009927 histidine phosphotransfer kinase activity IEP HCCA
BP GO:0016145 S-glycoside catabolic process IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013955 Rep_factor-A_C 271 391
IPR003871 DUF223 44 108
PLAZA 3.0 Dicots AT2G05642