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  5. Pp3c19_9910V3.1

Pp3c19_9910V3.1


Description : nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding


Gene families : OG_01_0001768 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_9910V3.1
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Mp7g11940.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11015.1 No alias class-V histone methyltransferase (Suv) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 1208 1283
IPR040689 SUVR5_Znf-C2H2_3rpt 1064 1096
IPR040689 SUVR5_Znf-C2H2_3rpt 887 934
IPR001214 SET_dom 1302 1380
No external refs found!