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  5. Pp3c1_15840V3.1

Pp3c1_15840V3.1


Description : ribosomal protein S27


Gene families : OG_01_0000825 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_15840V3.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT2G45710 No alias Zinc-binding ribosomal protein family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61110 No alias ribosomal protein S27 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.27 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.3 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_00679.1 No alias component eS27 of SSU proteome 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 30 84
No external refs found!