1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c1_20770V3.1

Pp3c1_20770V3.1


Description : RPA70-kDa subunit B


Gene families : OG_01_0005151 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005151_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_20770V3.1
Cluster HCCA: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
AT5G08020 No alias RPA70-kDa subunit B 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G61000 No alias Replication factor-A protein 1-related 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g651000 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g17030.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR013955 Rep_factor-A_C 326 472
IPR031657 REPA_OB_2 167 265
IPR004365 NA-bd_OB_tRNA 49 134
No external refs found!