1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c1_34270V3.1

Pp3c1_34270V3.1


Description : Polynucleotidyl transferase, ribonuclease H-like superfamily protein


Gene families : OG_01_0000022 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_34270V3.1
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_13830V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_19820V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_25320V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_3470V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_26090V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_12090V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_13770V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_23880V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_6059V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_24320V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_4050V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_22620V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_23500V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_8840V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_12660V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_12670V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_14610V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_24910V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_3840V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_5370V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_560V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_8150V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_12080V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_8570V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_14150V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_5020V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_13230V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_1660V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_8890V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_23020V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_24220V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_19390V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_26460V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_7700V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_9080V3.1 No alias No annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_2330V3.1 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_3840V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_3850V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_380V3.1 No alias No annotation 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_9410V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_1820V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_20440V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_4030V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!