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  5. Pp3c1_35100V3.1

Pp3c1_35100V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0004044 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_35100V3.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Pp3c13_1640V3.1 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_19760V3.1 No alias Pectate lyase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_19780V3.1 No alias Pectate lyase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
CC GO:0033573 high-affinity iron permease complex IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1905862 ferroxidase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!