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  5. Pp3c1_37070V3.1

Pp3c1_37070V3.1


Description : homeobox protein 16


Gene families : OG_01_0000195 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_37070V3.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT3G01220 No alias homeobox protein 20 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G40060 No alias homeobox protein 16 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15150 No alias homeobox 3 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65310 No alias homeobox protein 5 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_23440V3.1 No alias homeobox 1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_18190V3.1 No alias homeobox protein 16 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_36940V3.1 No alias homeobox protein 16 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_27150V3.1 No alias homeobox protein 16 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!