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  5. Pp3c1_43090V3.1

Pp3c1_43090V3.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0000433 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000433_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_43090V3.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_27010V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_40V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_20630V3.1 No alias CCCH-type zinc finger family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_80V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s124_80V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!