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  5. Pp3c20_14153V3.1

Pp3c20_14153V3.1


Description : DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain


Gene families : OG_01_0001775 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_14153V3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Cre12.g500900 No alias Protein degradation.peptide... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g08590.1 No alias SUMO E3 ligase (SIZ1) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA

No InterPro domains available for this sequence

No external refs found!