Pp3c20_22850V3.1

Description : disease resistance protein (TIR-NBS-LRR class)

Gene families : OG_01_0000343 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c20_22850V3.1
Cluster	HCCA: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
Pp3c10_19120V3.1	No alias	disease resistance protein (TIR-NBS-LRR class)	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_23198V3.1	No alias	No annotation	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_8120V3.1	No alias	disease resistance protein (TIR-NBS-LRR class)	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_2790V3.1	No alias	No annotation	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_6839V3.1	No alias	No annotation	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_2140V3.1	No alias	disease resistance protein (TIR-NBS-LRR class)	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_17200V3.1	No alias	No annotation	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_20460V3.1	No alias	No annotation	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_2620V3.1	No alias	Protein kinase family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_780V3.1	No alias	disease resistance protein (TIR-NBS-LRR class)	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_12950V3.1	No alias	Concanavalin A-like lectin protein kinase family protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_1030V3.1	No alias	Protein kinase family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_12660V3.1	No alias	No annotation	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006313	transposition, DNA-mediated	IEP	HCCA
BP	GO:0032196	transposition	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	11	129
IPR026906	LRR_5	701	825
IPR026906	LRR_5	346	392
IPR026906	LRR_5	519	633

External Links

No external refs found!