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  5. Pp3c20_5690V3.1

Pp3c20_5690V3.1


Description : eukaryotic translation initiation factor 3E


Gene families : OG_01_0003236 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_5690V3.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT3G57290 No alias eukaryotic translation initiation factor 3E 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g498100 No alias Protein biosynthesis.translation... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g01990.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08853.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!