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  5. Pp3c20_6270V3.1

Pp3c20_6270V3.1


Description : No annotation


Gene families : OG_01_0000097 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_6270V3.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre02.g141606 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g145127 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre05.g244250 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g392282 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g403800 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre11.g476050 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g484250 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g624950 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g627576 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g685450 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g06980.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g13570.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR035706 AAA_9 2323 2540
IPR035699 AAA_6 661 970
IPR041466 Dynein_AAA5_ext 1136 1278
IPR024743 Dynein_HC_stalk 1949 2291
IPR013602 Dynein_heavy_linker 130 532
IPR041589 DNAH3_AAA_lid_1 1504 1595
IPR024317 Dynein_heavy_chain_D4_dom 1665 1935
No external refs found!