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  5. Pp3c20_7130V3.1

Pp3c20_7130V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0004304 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_7130V3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT5G08390 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G23430 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g07080.1 No alias regulatory component of Katanin ATP-dependent... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!