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  5. Pp3c20_7280V3.1

Pp3c20_7280V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0008965 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_7280V3.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre04.g217914 No alias No description available 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g13550.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0010970 transport along microtubule IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0042073 intraciliary transport IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0099111 microtubule-based transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 79 108
IPR001680 WD40_repeat 194 230
IPR001680 WD40_repeat 322 354
No external refs found!