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  5. Pp3c21_10100V3.1

Pp3c21_10100V3.1


Description : JUMONJI 14


Gene families : OG_01_0000306 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_10100V3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT1G08620 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30810 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G63490 No alias transcription factor jumonji (jmjC) domain-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g169950 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g514250 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g20340.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g17910.1 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 268 314
IPR003347 JmjC_dom 441 557
IPR003349 JmjN 34 67
IPR001606 ARID_dom 109 193
No external refs found!