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  5. Pp3c21_10900V3.1

Pp3c21_10900V3.1


Description : Class II aminoacyl-tRNA and biotin synthetases superfamily protein


Gene families : OG_01_0004162 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004162_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pp3c21_10900V3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT4G31180 No alias Class II aminoacyl-tRNA and biotin synthetases... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g279150 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g09670.1 No alias aspartate-tRNA ligase 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!