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  5. Pp3c21_13130V3.1

Pp3c21_13130V3.1


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000274 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_13130V3.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G35700 No alias ERF family protein 38 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g08690.1 No alias transcription factor (DREB) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!