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  5. Pp3c21_13620V3.1

Pp3c21_13620V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0000911 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000911_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_13620V3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT3G13300 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g11710.1 No alias scaffold component VCS of mRNA decapping complex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_3440V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!