1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c21_1850V3.1

Pp3c21_1850V3.1


Description : expansin A1


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_1850V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 No alias expansin A7 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G62980 No alias expansin A18 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G69530 No alias expansin A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28950 No alias expansin A6 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02260 No alias expansin A9 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22700.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_19720V3.1 No alias expansin A1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_5780V3.1 No alias expansin A15 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_1940V3.1 No alias expansin A9 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 160 238
IPR009009 RlpA-like_DPBB 67 149
No external refs found!