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  5. AT2G15640

AT2G15640


Description : F-box family protein


Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G15640
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 ion channel activity IEP HCCA
MF GO:0005451 monovalent cation:proton antiporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005884 actin filament IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
BP GO:0006828 manganese ion transport IEP HCCA
BP GO:0006873 cellular ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0007204 positive regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015298 solute:cation antiporter activity IEP HCCA
MF GO:0015299 solute:proton antiporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
MF GO:0015491 cation:cation antiporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015691 cadmium ion transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
CC GO:0016324 apical plasma membrane IEP HCCA
BP GO:0017157 regulation of exocytosis IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030003 cellular cation homeostasis IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
MF GO:0033549 MAP kinase phosphatase activity IEP HCCA
BP GO:0034220 ion transmembrane transport IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043405 regulation of MAP kinase activity IEP HCCA
BP GO:0043407 negative regulation of MAP kinase activity IEP HCCA
BP GO:0043408 regulation of MAPK cascade IEP HCCA
BP GO:0043409 negative regulation of MAPK cascade IEP HCCA
CC GO:0045177 apical part of cell IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 ion homeostasis IEP HCCA
BP GO:0050848 regulation of calcium-mediated signaling IEP HCCA
BP GO:0050850 positive regulation of calcium-mediated signaling IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051046 regulation of secretion IEP HCCA
MF GO:0051139 metal ion:proton antiporter activity IEP HCCA
CC GO:0051286 cell tip IEP HCCA
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051648 vesicle localization IEP HCCA
BP GO:0051650 establishment of vesicle localization IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
CC GO:0060187 cell pole IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0060627 regulation of vesicle-mediated transport IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
CC GO:0070382 exocytic vesicle IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP HCCA
BP GO:0072507 divalent inorganic cation homeostasis IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
BP GO:0098655 cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
CC GO:0099503 secretory vesicle IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902533 positive regulation of intracellular signal transduction IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1903530 regulation of secretion by cell IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 216 364
IPR001810 F-box_dom 8 46
PLAZA 3.0 Dicots AT2G15640