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  5. Pp3c22_21010V3.1

Pp3c22_21010V3.1


Description : Nucleic acid-binding, OB-fold-like protein


Gene families : OG_01_0006588 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006588_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_21010V3.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cre07.g312750 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR025721 Exosome_cplx_N_dom 9 43
IPR019495 EXOSC1_C 76 139
No external refs found!