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  5. Pp3c22_22340V3.1

Pp3c22_22340V3.1


Description : histone H4


Gene families : OG_01_0000034 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_22340V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT1G07820 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28740 No alias histone H4 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45930 No alias Histone superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46320 No alias Histone superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G53730 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59690 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59970 No alias Histone superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g570000 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708200 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g710500 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g711800 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g713500 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714000 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714600 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g03090.1 No alias histone (H4) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g13440.1 No alias histone (H4) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g16840.1 No alias histone (H4) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g22460.1 No alias histone (H4) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g22470.1 No alias histone (H4) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11992.1 No alias histone (H4) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11997.1 No alias histone (H4) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!