AT2G16810

Description : F-box and associated interaction domains-containing protein

Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G16810
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AT1G23037	No alias	F-box associated ubiquitination effector family protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26515	No alias	F-box and associated interaction domains-containing protein	0.12	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30780	No alias	F-box associated ubiquitination effector family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30790	No alias	F-box and associated interaction domains-containing protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30920	No alias	F-box family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30930	No alias	F-box family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31080	No alias	F-box family protein	0.14	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31090	No alias	F-box family protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31163	No alias	F-box associated ubiquitination effector family protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31620	No alias	unknown protein; Has 9 Blast hits to 9 proteins in 2...	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32420	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32660	No alias	F-box and associated interaction domains-containing protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G43005	No alias	FUNCTIONS IN: molecular_function unknown; INVOLVED IN:...	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46840	No alias	F-box family protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46912	No alias	F-box associated ubiquitination effector family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47350	No alias	F-box associated ubiquitination effector family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47730	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47765	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47810	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50880	No alias	F-box and associated interaction domains-containing protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52495	No alias	No description available	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53360	No alias	F-box associated ubiquitination effector family protein	0.11	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53370	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G59690	No alias	F-box associated ubiquitination effector family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61060	No alias	F-box family protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67130	No alias	F-box family protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02660	No alias	F-box associated ubiquitination effector family protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13630	No alias	F-box associated ubiquitination effector family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16220	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16450	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G19630	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G23160	No alias	F-box family protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G31470	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G32470	No alias	F-box associated ubiquitination effector family protein	0.19	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G04660	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10240	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23960	No alias	F-box and associated interaction domains-containing protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49440	No alias	F-box associated ubiquitination effector family protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49450	No alias	F-box and associated interaction domains-containing protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52320	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G57580	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61340	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G09190	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13060	No alias	F-box associated ubiquitination effector family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19930	No alias	F-box and associated interaction domains-containing protein	0.15	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19940	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G29970	No alias	F-box and associated interaction domains-containing protein	0.14	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G38870	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18160	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22791	No alias	F-box family protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42430	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44345	No alias	F-box associated ubiquitination effector family protein	0.11	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50220	No alias	F-box family protein	0.17	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52610	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52620	No alias	F-box associated ubiquitination effector family protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62060	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62660	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65850	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013187	F-box-assoc_dom_typ3	242	278
IPR001810	F-box_dom	42	79

External Links

PLAZA 3.0 Dicots	AT2G16810

AT2G16810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation