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Description : photosystem II light harvesting complex gene 2.1
Gene families : OG_01_0000051 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000051_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c22_5610V3.1 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G29910 | No alias | chlorophyll A/B binding protein 3 | 0.12 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G29920 | No alias | chlorophyll A/B-binding protein 2 | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G29930 | No alias | chlorophyll A/B binding protein 1 | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G05070 | No alias | photosystem II light harvesting complex gene 2.2 | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G34420 | No alias | photosystem II light harvesting complex gene B1B2 | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G27690 | No alias | photosystem II light harvesting complex gene 2.3 | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G54270 | No alias | light-harvesting chlorophyll B-binding protein 3 | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Cre01.g066917 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.12 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp1g29620.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.1 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g05530.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g05880.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g05890.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g05980.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g06710.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g06720.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g06730.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g06750.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g06760.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.1 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g06770.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g06780.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g06790.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g08940.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g09180.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c2_36220V3.1 | No alias | photosystem II light harvesting complex gene 2.1 | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_04788.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_05966.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_05967.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_05968.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_12461.1 | No alias | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |