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  5. Pp3c23_13260V3.1

Pp3c23_13260V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0005194 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_13260V3.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT5G15550 No alias Transducin/WD40 repeat-like superfamily protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g710100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g03210.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!