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  5. Pp3c23_220V3.1

Pp3c23_220V3.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0000433 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000433_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_220V3.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_220V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_26910V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_300V3.1 No alias CCCH-type zinc finger family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_40V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_20630V3.1 No alias CCCH-type zinc finger family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_23020V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!