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  5. Pp3c23_7327V3.1

Pp3c23_7327V3.1


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG_01_0000387 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_7327V3.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_25370V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_22320V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_22330V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_18030V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_23190V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_3520V3.1 No alias target of AVRB operation1 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_24770V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_2580V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_2610V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_1020V3.1 No alias target of AVRB operation1 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_6190V3.1 No alias No annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_6200V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!