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  5. Pp3c23_8550V3.1

Pp3c23_8550V3.1


Description : Chlorophyll A-B binding family protein


Gene families : OG_01_0000039 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_8550V3.1
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Mp3g12510.1 No alias ELIP LHC-related protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g12520.1 No alias ELIP LHC-related protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g12530.1 No alias ELIP LHC-related protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g12540.1 No alias ELIP LHC-related protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g12550.1 No alias ELIP LHC-related protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g12560.1 No alias ELIP LHC-related protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g15970.1 No alias ELIP LHC-related protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18550.1 No alias ELIP LHC-related protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18560.1 No alias ELIP LHC-related protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18580.1 No alias ELIP LHC-related protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18590.1 No alias ELIP LHC-related protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18600.1 No alias ELIP LHC-related protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18610.1 No alias ELIP LHC-related protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18620.1 No alias ELIP LHC-related protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18630.1 No alias ELIP LHC-related protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g14540.1 No alias ELIP LHC-related protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g20750.1 No alias ELIP LHC-related protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g20760.1 No alias ELIP LHC-related protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g20770.1 No alias ELIP LHC-related protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_18250V3.1 No alias Chlorophyll A-B binding family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_16700V3.1 No alias Chlorophyll A-B binding family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_05110.1 No alias LHC-related protein (ELIP) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_10821.1 No alias LHC-related protein (ELIP) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 110 202
No external refs found!