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  5. Pp3c24_18330V3.1

Pp3c24_18330V3.1


Description : Ribosomal protein L13 family protein


Gene families : OG_01_0003788 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003788_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_18330V3.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G78630 No alias Ribosomal protein L13 family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g264350 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g07030.1 No alias component psRPL13 of large ribosomal subunit proteome 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 102 225
No external refs found!