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  5. Pp3c24_9260V3.1

Pp3c24_9260V3.1


Description : expansin A1


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_9260V3.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_12000V3.1 No alias expansin A14 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_18030V3.1 No alias expansin A14 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_16280V3.1 No alias expansin A14 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_12870V3.1 No alias expansin A14 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_14900V3.1 No alias expansin A14 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_870V3.1 No alias expansin A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 21 96
No external refs found!