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  5. Pp3c25_1010V3.1

Pp3c25_1010V3.1


Description : tubulin alpha-5


Gene families : OG_01_0000395 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_1010V3.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT1G50010 No alias tubulin alpha-2 chain 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G14960 No alias Tubulin/FtsZ family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G19770 No alias tubulin alpha-3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G19780 No alias tubulin alpha-5 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g190950 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre04.g216850 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g24530.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g23500.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g00550.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08159.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
IPR003008 Tubulin_FtsZ_GTPase 3 213
No external refs found!