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  5. Pp3c25_7030V3.1

Pp3c25_7030V3.1


Description : Photosystem II reaction center PsbP family protein


Gene families : OG_01_0007190 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_7030V3.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT4G15510 No alias Photosystem II reaction center PsbP family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre08.g362900 No alias Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g27590.1 No alias PPD1 protein involved in PS-I assembly 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!