Pp3c26_4470V3.1

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_01_0000337 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000337_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c26_4470V3.1
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AT3G07810	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G13224	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_33540V3.1	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_9350V3.1	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_17570V3.1	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	177	245
IPR000504	RRM_dom	88	155

External Links

No external refs found!