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  5. Pp3c27_2180V3.1

Pp3c27_2180V3.1


Description : SNF7 family protein


Gene families : OG_01_0003600 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c27_2180V3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT5G04850 No alias SNF7 family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 15 204
No external refs found!