1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c27_5110V3.1

Pp3c27_5110V3.1


Description : chaperonin 60 beta


Gene families : OG_01_0001834 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001834_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c27_5110V3.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G55490 No alias chaperonin 60 beta 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G13470 No alias TCP-1/cpn60 chaperonin family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g741450 No alias External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09413.1 No alias chaperone (Hsp60) 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!