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  5. Pp3c27_6210V3.1

Pp3c27_6210V3.1


Description : No annotation


Gene families : OG_01_0000097 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c27_6210V3.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre02.g141606 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g145127 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre05.g244250 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g392282 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g403800 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre11.g476050 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g484250 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g624950 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g627576 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g685450 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g06980.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g13570.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041228 Dynein_C 3509 3817
IPR013602 Dynein_heavy_linker 588 992
IPR035706 AAA_9 2753 2973
IPR041589 DNAH3_AAA_lid_1 1960 2038
IPR041466 Dynein_AAA5_ext 1612 1739
IPR004273 Dynein_heavy_D6_P-loop 3218 3338
IPR024743 Dynein_HC_stalk 2378 2721
IPR035699 AAA_6 1120 1446
IPR041658 AAA_lid_11 3339 3503
IPR024317 Dynein_heavy_chain_D4_dom 2105 2364
No external refs found!