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  5. Pp3c27_6610V3.1

Pp3c27_6610V3.1


Description : nitrite reductase 1


Gene families : OG_01_0004926 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c27_6610V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT2G15620 No alias nitrite reductase 1 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g410750 No alias Nutrient uptake.nitrogen assimilation.nitrate... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g24720.1 No alias nitrite reductase 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12386.1 No alias nitrite reductase 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 481 591
IPR005117 NiRdtase/SiRdtase_haem-b_fer 147 212
IPR005117 NiRdtase/SiRdtase_haem-b_fer 404 466
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 222 377
No external refs found!