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  5. Pp3c2_1820V3.1

Pp3c2_1820V3.1


Description : autophagy 9 (APG9)


Gene families : OG_01_0002338 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_1820V3.1
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Cre09.g391500 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_9800V3.1 No alias autophagy 9 (APG9) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13794.3 No alias component ATG9 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!