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  5. Pp3c2_2850V3.1

Pp3c2_2850V3.1


Description : Ubiquitin C-terminal hydrolases superfamily protein


Gene families : OG_01_0003402 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_2850V3.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Mp1g24510.1 No alias protein factor (USP39) of U4/U6 U5 small nuclear... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02185.1 No alias protein factor (USP39) of U4/U6 U5 small nuclear... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 218 547
IPR001607 Znf_UBP 117 178
No external refs found!