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  5. Pp3c2_30110V3.1

Pp3c2_30110V3.1


Description : No annotation


Gene families : OG_01_0000747 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000747_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_30110V3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_11520V3.1 No alias nuclear RNA polymerase A1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_17080V3.1 No alias RNA polymerase II large subunit 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_12280V3.1 No alias nuclear RNA polymerase C1 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_15150V3.1 No alias nuclear RNA polymerase A1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_29710V3.1 No alias RNA polymerase II large subunit 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_35870V3.1 No alias nuclear RNA polymerase C1 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_14790V3.1 No alias nuclear RNA polymerase C1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_12661V3.1 No alias nuclear RNA polymerase A1 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_12700V3.1 No alias nuclear RNA polymerase A1 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_12713V3.1 No alias nuclear RNA polymerase A1 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_17770V3.1 No alias nuclear RNA polymerase C1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_17780V3.1 No alias nuclear RNA polymerase C1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006313 transposition, DNA-mediated IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0032196 transposition IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!