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  5. Pp3c2_3190V3.1

Pp3c2_3190V3.1


Description : ARM repeat superfamily protein


Gene families : OG_01_0001725 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_3190V3.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT2G34357 No alias ARM repeat superfamily protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G23540 No alias ARM repeat superfamily protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre19.g751197 No alias No description available 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g25050.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012978 Uncharacterised_NUC173 356 557
No external refs found!