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  5. AT2G21950

AT2G21950


Description : SKP1 interacting partner 6


Gene families : OG_01_0000018 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G21950
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT4G14905 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003958 NADPH-hemoprotein reductase activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007602 phototransduction IEP HCCA
MF GO:0008022 protein C-terminus binding IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
BP GO:0009268 response to pH IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009585 red, far-red light phototransduction IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009649 entrainment of circadian clock IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009757 hexose mediated signaling IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0010031 circumnutation IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010044 response to aluminum ion IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010255 glucose mediated signaling pathway IEP HCCA
BP GO:0010269 response to selenium ion IEP HCCA
BP GO:0010447 response to acidic pH IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0015203 polyamine transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015846 polyamine transport IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032456 endocytic recycling IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050879 multicellular organismal movement IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051341 regulation of oxidoreductase activity IEP HCCA
BP GO:0051353 positive regulation of oxidoreductase activity IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071291 cellular response to selenium ion IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0098876 vesicle-mediated transport to the plasma membrane IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902551 regulation of catalase activity IEP HCCA
BP GO:1902553 positive regulation of catalase activity IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
BP GO:2000468 regulation of peroxidase activity IEP HCCA
BP GO:2000470 positive regulation of peroxidase activity IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 165 209
IPR006652 Kelch_1 118 160
IPR001810 F-box_dom 22 60
PLAZA 3.0 Dicots AT2G21950