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  5. Pp3c2_35520V3.1

Pp3c2_35520V3.1


Description : LSD1-like 3


Gene families : OG_01_0002695 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_35520V3.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Pp3c1_1170V3.1 No alias LSD1-like 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_6380V3.1 No alias LSD1-like 3 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_35420V3.1 No alias LSD1-like 3 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!