AT2G22450


Description : riboflavin biosynthesis protein, putative


Gene families : OG_01_0001571 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001571_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G22450
Cluster HCCA: Cluster_219


Type GO Term Name Evidence Source
MF GO:0003935 GTP cyclohydrolase II activity ISS Interproscan
BP GO:0007623 circadian rhythm RCA Interproscan
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity ISS Interproscan
BP GO:0009231 riboflavin biosynthetic process ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
CC GO:0000785 chromatin IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP HCCA
MF GO:0004407 histone deacetylase activity IEP HCCA
MF GO:0004416 hydroxyacylglutathione hydrolase activity IEP HCCA
MF GO:0004777 succinate-semialdehyde dehydrogenase (NAD+) activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006333 chromatin assembly or disassembly IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006538 glutamate catabolic process IEP HCCA
BP GO:0006540 glutamate decarboxylation to succinate IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0009013 succinate-semialdehyde dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009065 glutamine family amino acid catabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009448 gamma-aminobutyric acid metabolic process IEP HCCA
BP GO:0009450 gamma-aminobutyric acid catabolic process IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009649 entrainment of circadian clock IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010031 circumnutation IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016695 oxidoreductase activity, acting on hydrogen as donor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030527 structural constituent of chromatin IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032091 negative regulation of protein binding IEP HCCA
BP GO:0032365 intracellular lipid transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033354 chlorophyll cycle IEP HCCA
MF GO:0033558 protein deacetylase activity IEP HCCA
BP GO:0034196 acylglycerol transport IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043393 regulation of protein binding IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043649 dicarboxylic acid catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0046995 oxidoreductase activity, acting on hydrogen as donor, with other known acceptors IEP HCCA
BP GO:0048571 long-day photoperiodism IEP HCCA
BP GO:0048574 long-day photoperiodism, flowering IEP HCCA
MF GO:0050454 coenzyme F420 hydrogenase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050879 multicellular organismal movement IEP HCCA
BP GO:0051098 regulation of binding IEP HCCA
BP GO:0051100 negative regulation of binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090415 7-hydroxymethyl chlorophyll a reductase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901965 endoplasmic reticulum to chloroplast transport IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1990052 ER to chloroplast lipid transport IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000422 DHBP_synthase_RibB 111 303
IPR032677 GTP_cyclohydro_II 316 471
PLAZA 3.0 Dicots AT2G22450