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  5. Pp3c3_10570V3.1

Pp3c3_10570V3.1


Description : RING/U-box superfamily protein


Gene families : OG_01_0000398 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_10570V3.1
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AT1G63170 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61180 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g06960.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s52_10V3.1 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!