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  5. AT2G22600

AT2G22600


Description : RNA-binding KH domain-containing protein


Gene families : OG_01_0018062 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G22600
Cluster HCCA: Cluster_268


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000719 photoreactive repair IEP HCCA
CC GO:0000798 nuclear cohesin complex IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0007130 synaptonemal complex assembly IEP HCCA
CC GO:0008278 cohesin complex IEP HCCA
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009650 UV protection IEP HCCA
CC GO:0009898 cytoplasmic side of plasma membrane IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010466 negative regulation of peptidase activity IEP HCCA
BP GO:0010951 negative regulation of endopeptidase activity IEP HCCA
MF GO:0015204 urea transmembrane transporter activity IEP HCCA
BP GO:0015840 urea transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
BP GO:0019755 one-carbon compound transport IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
MF GO:0032442 phenylcoumaran benzylic ether reductase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0045861 negative regulation of proteolysis IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
CC GO:0048555 generative cell nucleus IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052547 regulation of peptidase activity IEP HCCA
BP GO:0052548 regulation of endopeptidase activity IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0070193 synaptonemal complex organization IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0098562 cytoplasmic side of membrane IEP HCCA
MF GO:0098599 palmitoyl hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 144 206
IPR004088 KH_dom_type_1 565 626
IPR004088 KH_dom_type_1 285 328
IPR004088 KH_dom_type_1 27 81
PLAZA 3.0 Dicots AT2G22600