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  5. Pp3c3_12340V3.1

Pp3c3_12340V3.1


Description : cysteine-rich RLK (RECEPTOR-like protein kinase) 8


Gene families : OG_01_0000013 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_12340V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_10414V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_12819V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_23530V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_1440V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_2690V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_26970V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_13450V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_16200V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_16241V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_18410V3.1 No alias No annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_30050V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_12360V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_27080V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_29090V3.1 No alias DNA/RNA polymerases superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_32070V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_17810V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_2320V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_10660V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_7160V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_14003.1 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 19 76
No external refs found!